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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906472.1_cds_XP_016456622.1_50438
CDS Infomation

[gene=LOC107780586] [db_xref=GeneID:107780586] [protein=neurochondrin-like isoform X2] [protein_id=XP_016456622.1] [location=join(11830..11901,12414..12592,12865..13001,13118..13221,13348..13443,14048..14141,15121..15241,15359..15552,15836..15939,16012..16067,16737..16826,16923..17022,17166..17270,17354..17426,18283..18446,18683..18740,18867..18952)] [gbkey=CDS]
Sequence

ATGACCACGCCGCCATTCGCAAGGTTTACGACGCAGTCGGACCTCAATTCCTCCACCGCC
TTCTTCGTACTGTCTGAAAATTTGTTCTTAATAGGAACGGGGAAAGGAAGTGATGGCCCC
GGCGATAACCGTGATGCGTACTTGCAGTTGTCAATCACTGTTCTTGCAGCATTTTGTAGA
GTTCCCGAGATTGCGGCTTCTGAAGATATGGTTACTAAGATTCCTCTCATTGTAGAGATG
ATGTCCGCAAAAGCAGGGTCACCTATCATTGAAGAATGCTATGAATTTTTGTTTTTGGTC
TCAACGGCCAATGAAGAAGGGGTTAAAACCTTGTACGAATCTGGTGGCTTGCATGTGGTA
GCTTCACAAATGTCAATTCTACCAGATGGTTCTCATATGATTGAACTTGCTATGAGACTT
GTGCAAATCATGGCTATTAAGCTACCCTCAGAAAATGTTTATTCTGAGCATCCAGCTGAT
CTATCAATGGTGGTGGCTGCAGTTGCAAAGCAGTTTGCTGTACTGCAGAGTGCACTGAAG
TTTGAAGCACTTCACCTGCTATCAACTATCCTATCCAACAGTTATTCTGTGCCTGTATAT
GATGCACTTCGCTTGATGAAAAATGATGTTTGGTCGACAAACATGCGCATTGGTATTGTA
GCTATCTTGCAGAATCGTGTCGCACCTTCGCATAAGCTTCAGGCTCTTATTCTGGCTGAG
TCTGTCATATCAATTGTCGGTGAAGGGTGGCTAATTGGGGAAATGAACTTAACTGATTCC
CAGGATTCCCTGCCTGCTGACAGGTGTATTCTGCTTGTTTTGGAGTCATCCAGGGTTGAA
ATTGCTGTGCTTTTAAATGACCTAGCATACTTAAAATATGAAGCCTCCAAGGAGTCCTCA
AATAGAGAGAATATTCTTGTGAAGCAGAGGAATCTTGGCGTAGCCTTCTCTTTGGTTGAA
AAAATAATTAAACTTATTTCAAGTTTTGGTGGCGAAGAGTCAACTGCTAATGCTGTTATC
AGTGAGAGCACTTTCACAAAAATCATTTCTGGGCTCAATGAGACAATTGGTGTTGTTTTG
GACTATCTACGAGATGCTAAGGAGCATGGACAGATGAAAGGGGATGATCTTCTAGCAGCA
GTGCGAGTAATTGGAAGCTATCTTGCAGAAGCACCTCATGCATGTAAAGACAAGGTCACG
GCACTCCTAGGTTATATGCTTTCAATTGAAGGGGAAGATGAATTGAGTCCTTTTTATTCC
ATCTGTTTTTTGCTTCCAATGCTGTGTCAAATAACTCTCAAGACTGGAGGTTGTAAAATT
TTAGCTTCCTCAGGTGCACTCAGAGAAGTCGTTGGTTGTCTCATTGCGTTGATTGAACAA
AACAATTATACATCCAAGGATAATGGTTCTATATTCTTGGCGTGCGACACAGTCTTGAAT
CTTCTTCTAAAGCGCGAGCAAATCAAATTTCCCTCAGATGATCCCAGTTTTATCAGACTT
TTAGTTGCATTGTCACATTGGGCAGAGGGTACGGATGATGCATCTATTGTCATGATGGCA
TCAAGCATCTGTTCACTTATACTTGATTTGAAGTCAGAGGAAGCTCTTCTAAATCATCCC
GACTTTGCTGCTGGCAATATTACTAGTCTGTCGAAGCTCATTGGACGAAGCTTTGCTATG
TGTGGTCAGGAGTTGATGTCCGATGATGCTAAAGCTGAAGTTGATCTATTCCAGATAATT
AGCTCAGCATATTCATCATGGGCTGATCGATTCCCTCGCATTAGACAAGCTGTCGAGGGC
TCACGCCCTTTTCCATTTCGACATGTTTCATAG

Peptide Sequence

PEP ID

XP_016456622.1
PEP Infomation

PREDICTED: neurochondrin-like isoform X2 [Nicotiana tabacum]
Sequence

MTTPPFARFTTQSDLNSSTAFFVLSENLFLIGTGKGSDGPGDNRDAYLQLSITVLAAFCR
VPEIAASEDMVTKIPLIVEMMSAKAGSPIIEECYEFLFLVSTANEEGVKTLYESGGLHVV
ASQMSILPDGSHMIELAMRLVQIMAIKLPSENVYSEHPADLSMVVAAVAKQFAVLQSALK
FEALHLLSTILSNSYSVPVYDALRLMKNDVWSTNMRIGIVAILQNRVAPSHKLQALILAE
SVISIVGEGWLIGEMNLTDSQDSLPADRCILLVLESSRVEIAVLLNDLAYLKYEASKESS
NRENILVKQRNLGVAFSLVEKIIKLISSFGGEESTANAVISESTFTKIISGLNETIGVVL
DYLRDAKEHGQMKGDDLLAAVRVIGSYLAEAPHACKDKVTALLGYMLSIEGEDELSPFYS
ICFLLPMLCQITLKTGGCKILASSGALREVVGCLIALIEQNNYTSKDNGSIFLACDTVLN
LLLKREQIKFPSDDPSFIRLLVALSHWAEGTDDASIVMMASSICSLILDLKSEEALLNHP
DFAAGNITSLSKLIGRSFAMCGQELMSDDAKAEVDLFQIISSAYSSWADRFPRIRQAVEG
SRPFPFRHVS

Transcript Sequence

Gene sequence data has not been registered.